org.openprovenance.prov.tutorial.tutorial5

Class ProvenanceChallenge2

java.lang.Object

org.openprovenance.prov.tutorial.tutorial5.ChallengeUtil

org.openprovenance.prov.tutorial.tutorial5.ChallengeCommon<Collection<StatementOrBundle>>

org.openprovenance.prov.tutorial.tutorial5.ProvenanceChallenge2

All Implemented Interfaces:

Challenge<Collection<StatementOrBundle>>, ChallengeConstants

public class ProvenanceChallenge2
extends ChallengeCommon<Collection<StatementOrBundle>>

ProvToolbox Tutorial 5: provenance challenge workflow in Java and serializing it to SVG (in a file) and to PROVN (on the console).

Author:

lucmoreau

See Also:

provenance challenge

Field Summary

Fields inherited from class org.openprovenance.prov.tutorial.tutorial5.ChallengeUtil

name, pFactory

Fields inherited from interface org.openprovenance.prov.tutorial.tutorial5.ChallengeConstants

ALIGN_WARP, CONVERT, FILE, PC1_NS, PC1_PREFIX, PRIM_NS, PRIM_PREFIX, RESLICE, ROLE_H1, ROLE_H2, ROLE_H3, ROLE_H4, ROLE_HDR, ROLE_HDR_REF, ROLE_I1, ROLE_I2, ROLE_I3, ROLE_I4, ROLE_IMG, ROLE_IMG_REF, ROLE_IN, ROLE_OUT, ROLE_PARAM, SLICER, SOFTMEAN, STRING, VALUE

Constructor Summary

Constructors

Constructor and Description
ProvenanceChallenge2(ProvFactory pFactory)

Method Summary

Modifier and Type	Method and Description
Collection<StatementOrBundle>	align(String imgfile, String imglabel, String hdrfile, String hdrlabel, String imgreffile1, String imgreflabel, String hdrreffile1, String hdrreflabel, String activity, String warpfile, String warplabel, String workflow, String agent)
Collection<StatementOrBundle>	convert(String pgmfile, String activity, String giffile, String giflabel, String workflow, String agent)
static void	main(String[] args)
Document	makeDocument()
Collection<StatementOrBundle>	reslice(String warp, String activity, String imgfile, String imglabel, String hdrfile, String hdrlabel, String workflow, String agent)
Collection<StatementOrBundle>	slice(String imgatlas, String hdratlas, String params, String paramslabel, String paramsvalue, String activity, String pgmfile, String pgmlabel, String workflow, String agent)
Collection<StatementOrBundle>	softmean(String imgfile1, String hdrfile1, String imgfile2, String hdrfile2, String imgfile3, String hdrfile3, String imgfile4, String hdrfile4, String activity, String imgatlas, String imglabel, String hdratlas, String hdrlabel, String workflow, String agent)

Methods inherited from class org.openprovenance.prov.tutorial.tutorial5.ChallengeCommon

overallWorkflow

Methods inherited from class org.openprovenance.prov.tutorial.tutorial5.ChallengeUtil

closingBanner, doConversions, newFile, newParameter, newUsed, newUsed, newWasDerivedFrom, newWasGeneratedBy, newWasGeneratedBy, openingBanner, pc, prim

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ProvenanceChallenge2

public ProvenanceChallenge2(ProvFactory pFactory)

Method Detail

align

public Collection<StatementOrBundle> align(String imgfile,
                                           String imglabel,
                                           String hdrfile,
                                           String hdrlabel,
                                           String imgreffile1,
                                           String imgreflabel,
                                           String hdrreffile1,
                                           String hdrreflabel,
                                           String activity,
                                           String warpfile,
                                           String warplabel,
                                           String workflow,
                                           String agent)

reslice

public Collection<StatementOrBundle> reslice(String warp,
                                             String activity,
                                             String imgfile,
                                             String imglabel,
                                             String hdrfile,
                                             String hdrlabel,
                                             String workflow,
                                             String agent)

softmean

public Collection<StatementOrBundle> softmean(String imgfile1,
                                              String hdrfile1,
                                              String imgfile2,
                                              String hdrfile2,
                                              String imgfile3,
                                              String hdrfile3,
                                              String imgfile4,
                                              String hdrfile4,
                                              String activity,
                                              String imgatlas,
                                              String imglabel,
                                              String hdratlas,
                                              String hdrlabel,
                                              String workflow,
                                              String agent)

slice

public Collection<StatementOrBundle> slice(String imgatlas,
                                           String hdratlas,
                                           String params,
                                           String paramslabel,
                                           String paramsvalue,
                                           String activity,
                                           String pgmfile,
                                           String pgmlabel,
                                           String workflow,
                                           String agent)

convert

public Collection<StatementOrBundle> convert(String pgmfile,
                                             String activity,
                                             String giffile,
                                             String giflabel,
                                             String workflow,
                                             String agent)

makeDocument

public Document makeDocument()

main

public static void main(String[] args)